r package

transformGamPoi

Variance stabilizing transformation for Gamma Poisson distributed data

einsum

Einstein Summation for Arrays in R

glmGamPoi: fitting Gamma-Poisson generalized linear models on single cell count data

Fit Gamma-Poisson Generalized Linear Models Reliably.

glmGamPoi

Fit Gamma-Poisson Generalized Linear Models Reliably

sparseMatrixStats

Implementation of the `matrixStats` API for sparse matrices

proDA: Probabilistic Dropout Analysis for Identifying Differentially Abundant Proteins in Label-Free Mass Spectrometry

Decide which proteins are differentially abundant in label-free mass spectormetry without imputation.

proDA

R package for "Protein Differential Abundance Analysis for Label-Free Mass Spectrometry Data"

ggupset

Plot a combination matrix instead of the standard x-axis and create UpSet plots with ggplot2.

mixdir

R package for clustering high dimensional categorical data

MixDir: Scalable Bayesian Clustering for High-Dimensional Categorical Data

Cluster high-dimensional categorical observations using an approximate Bayesian inference algorithm