I am a PhD student at the EMBL Heidelberg in the Huber group. I am interested in developing statistical methods and tools for the analysis of biological data.

The different ways to encode categorical variables in linear models

Making DESeq2 ready for Single Cell Data

Two month ago, I started my PhD and the first assignment I got was to optimize the performance of an R package called DESeq2. In …

In this blog post I will explore the features available in Rmarkdown / blogdown.
hist(rnorm(1000)) Let’s see if Latex renderning works …

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#### glmGamPoi

#### sparseMatrixStats

#### proDA

#### ggupset

#### mixdir

#### tidygenomics

#### ggsignif

#### iGEM 2014

Fit Gamma-Poisson Generalized Linear Models Reliably

Implementation of the `matrixStats`

API for sparse matrices

R package for “Protein Differential Abundance Analysis for Label-Free Mass Spectrometry Data”

Plot a combination matrix instead of the standard x-axis and create UpSet plots with ggplot2.

R package for clustering high dimensional categorical data

Tidy Verbs for Dealing with Genomic Data Frames

A `ggplot2`

extension to add significance brackets

Student Competition for Synthetic Biology

Decide which proteins are differentially abundant in label-free mass spectormetry without imputation.

Cluster high-dimensional categorical observations using an approximate Bayesian inference algorithm

Circularization of Xylanase can improve its thermostability