Recent Posts

Making DESeq2 ready for Single Cell Data

Two month ago, I started my PhD and the first assignment I got was to optimize the performance of an R package called DESeq2. In …

In this blog post I will explore the features available in Rmarkdown / blogdown. hist(rnorm(1000)) Let’s see if Latex renderning works …

Projects

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proDA

R package for “Protein Differential Abundance Analysis for Label-Free Mass Spectrometry Data”

ggupset

Plot a combination matrix instead of the standard x-axis and create UpSet plots with ggplot2.

mixdir

R package for clustering high dimensional categorical data

tidygenomics

Tidy Verbs for Dealing with Genomic Data Frames

ggsignif

A ggplot2 extension to add significance brackets

iGEM 2014

Student Competition for Synthetic Biology